Skip to main content
Reference | Publication | Biosciences Division

BIO 2005 - 1999 Publications

2005

Kirmaier, C; Bautista, James; Laible, Philip; Hanson, Deborah; Holten, DProbing the contribution of electronic coupling to the directionality of electron transfer in photosynthetic reaction centers.Journal of Physical Chemistry B(2005)

Sun, W; Xu, X; Pavlova, Malinka; Edwards, A; Joachimiak, Andrzej; Savchenko, AlexeiThe crystal structure of a novel SAM-dependent methyltransferase PH1915 from Pyrococcus horikoshii.Protein Science(2005)

Scholle, Michael; Kriplani, Ushma; Pabon, A; Sishtla, Kamakshi; Glucksman, MarcMapping protease substrates using a biotinylated phage substrate library.ChemBioChem(2005)

Petrova, Tatiana; Steuber, H; Hazemann, I; Cousido-Siah, A; Mitschler, Andre; Chung, Roland; Oka, M; Klebe, G; El-Kabbani, Ossama; Joachimiak, Andrzej; Podjarny, AlbertoFactorizing selectivity determinants of inhibitor binding toward aldose and aldehyde reductases : stuctural and thermodynamic properties of the aldose reductase mutant leu300pro-fidarestat complex.Journal of Medicinal Chemistry(2005)

Cuff, Marianne; Miller, D; Xu, X; Anderson, Wayne; Edwards, Ann; Joachimiak, Andrzej; Savchenko, AlexeiCrystal structure of a predicted precorrin-8x methylmutase from Thermoplasma acidophilum.Proteins(2005)

Singh, S; Korolev, O; Zarembinski, T; Collart, Frank; Joachimiak, AndrzejCrystal structure of a novel shikimate dehydrogenase from haemophilus influenzae.Journal of Biochemistry(2005)

Wu, Ruiying; Skaar, E; Zhang, Rongguang; Joachimiak, Grazyna; Gornicki, Piotr; Schneewind, Olaf; Joachimiak, AndrzejStaphylococcus aureus IsdG and IsdI, heme degrading enzymes with structural similiarity to monooxygenases.Journal of Biochemistry(2005)

2004

Savchenko, Alexei; Skarina, T; Evdokimova, E; Watson, Jimmy; Laskowski, R; Arrowsmith, Cheryl; Edwards, Ann; Joachimiak, Andrzej; Zhang, RongguangX-ray crystal structure of CutA from thermotoga maritima at 1.4 {Angstrom} resolution.Proteins(2004)

Babnigg, Gyorgy; Giometti, CarolGELBANK : A database of annotated two-dimensional gel electrophoresis patterns of biological systems with completed genomes.Nucleic Acids Research(2004)

Ruiz, F; Hazemann, I; Mitschler, Andre; Joachimiak, Andrzej; Schneider, Therese; Karplus, M; Podjarny, AlbertoThe crystallographic structure of the aldose reductase-IDD552 complex shows direct proton donation from tyrsine 48.Acta Crystallographica. Section D(2004)

Brunzelle, Joseph; Wu, Ruiying; Collart, Frank; Joachimiak, Andrzej; Anderson, WayneCrystal structure of bacillus subtilis YdaF protein : a putative ribosomal N-acetyltransferase.Proteins(2004)

Pokkuluri, Phani; Londer, Yuri; Duke, Norma; Long, William; Schiffer, MarianneFamily of cytochrome c{sub 7}-type proteins from Geobacter sulfurreducens : the structure of one cytochrome c{sub 7} at 1.45 {Angstrom} resolution.Biochemistry(2004)

Xu, Y; Zhang, Rongguang; Joachimiak, Andrzej; Carr, Paul; Huber, T; Vasudevan, S; Ollis, DavidStructure of the N-terminal domain of Escherichia coli glutamine synthetase adenylyltransferase.Structure(2004)

Devedjiev, Y; Surendranath, Y; Derewenda, Urszula; Gabrys, A; Cooper, D; Zhang, Rongguang; Lezondra, L; Joachimiak, Andrzej; Derewenda, ZygmuntThe structure and ligand binding properties of the B. subtilis YkoF gene product, a member of a novel family of thiamin/HMP-binding proteins.Journal of Molecular Biology(2004)

Zhang, Rongguang; Wu, Ruiying; Joachimiak, Grazyna; Mazmanian, S; Missiakas, D; Gornicki, Piotr; Schneewind, Olaf; Joachimiak, AndrzejStructures of sortase B from staphylococcus aureus and bacillus anthracis reveal catalytic amino acid triad in the active site.Structure(2004)

Sanishvili, Ruslan; Beasley, S; Skarina, T; Glesne, David; Joachimiak, Andrzej; Edwards, A; Savchenko, AlexeiThe crystal structure of escherichia coli MoaB suggests a probable role in molybdenum cofactor synthesis.Journal of Biochemistry(2004)

Xing, Y; Liu, D; Zhang, Rongguang; Joachimiak, Andrzej; Songyang, Z; Xu, WStructural basis of membrane targeting by the phox homology domain of cytokine-independent survival kinase (CISK-PX).Journal of Biochemistry(2004)

Stevens, FredAmyloid formation : an emulation of matrix protein assembly?Amyloid(2004)

Mandava, Suneeta; Makowski, Lee; Devarapalli, Satish; Uzubell, J; Rodi, DianeRELIC - a bioinformatics server for combinatorial peptide analysis and identification of protein-ligand interaction sites.Proteomics(2004)

Kim, Youngchang; Yakunin, A; Kuznetsova, E; Xu, X; Pennycooke, M; Gu, J; Cheung, Fan-Bill; Proudfoot, M; Arrowsmith, Cheryl; Joachimiak, Andrzej; Edwards, AStructure- and function-based characterization of a new phosphoglycolate phosphatase from Thermoplasma acidophilum.Journal of Biochemistry(2004)

Adams, M; Joachimiak, Andrzej; Kim, Rubin; Montelione, G; Norvell, John2003 NIH protein structure intiative workshop in protein production and crystallization for structural and functional genomics.Journal of Structural and Functional Genomics(2004)

Wilson, J; Malakhova, Margarita; Zhang, Rongguang; Joachimiak, Andrzej; Hegde, RCrystal structure of the Dachsund homology domain of human SKI.Structure(2004)

2003

Zarembinski, T; Kim, Youngchang; Peterson, Kelly; Dharamsi, A; Arrowsmith, Cheryl; Edwards, A; Joachimiak, AndrzejDeep trefoil knot implicated in RNA binding found in an archaebacterial protein.Proteins(2003)

Abe, Shigeaki; Chen, LiaohaiTuning the photophysical properties of an ionic conjugated polymer through interaction with conventional polyelectrolytes.Journal of Polymer Science Part B: Polymer Physics(2003)

Zhu, G; Zhai, P; He, X; Terzyan, S; Zhang, Rongguang; Joachimiak, Andrzej; Tang, J; Zhang, XCrystal structure of the human GGA1 GAT domain.Biochemistry(2003)

Kwon, T; Chang, Jennifer; Kwak, E; Lee, Chang Wook; Joachimiak, Andrzej; Kim, Youngchang; Lee, Joanna; Cho, YMechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet.The EMBO Journal(2003)

Makowski, Lee; Soares, AlexeiEstimating the diversity of peptide populations from limited sequence data.Bioinformatics(2003)

Cerny, Elizabeth; Bhattacharyya, M.Low-volume, high-sensitivity assay for cadmium in blood and urine using conventional atomic absorption spectrophotometry.Analytical Biochemistry(2003)

Kirmaier, C; Laible, Philip; Hanson, Deborah; Holten, DB-side charge separation in reaction centers from Rb. capsulatus : nanosecond-timescale electron transfer from H{sub B}{sup -} to O{sub B}.Biochemistry(2003)

Castagnoli, LMapping protein-protein interactions with phage-displayed combinatorial peptide libraries.Current Protocols in Cell Biology(2003)

Thuresson, E; Malkowski, Michael; Lakkides, K; Rieke, C; Mulichak, Anne; Ginell, Stephan; Garavito, R.; Smith, WMutational and x-ray crystallographic analysis of the interaction of dihomo-y-linolenic acid with prostaglandin endoperoxide H synthases.Journal of Biochemistry(2003)

Mazmanian, S; Skaar, E; Gaspar, A; Humayun, Md. Tanim; Gornicki, Piotr; Jelenska, J; Joachimiak, Andrzej; Missiakas, D; Schneewind, OlafPassage of heme-iron across the envelope of Staphylococcus aureus.Science(2003)

Liu, Yi-Ping; Xiong, Y; Naidenko, Olga; Liu, J; Zhang, Rongguang; Joachimiak, Andrzej; Kronenberg, M; Cheroutre, H; Reinherz, E; Wang, JThe crystal structure of a TL/CD8{alpha}{alpha} complex at 2.1 {angstrom} resolution : implications for modulation of T cell activation and memory.Immunity(2003)

Sanishvili, Ruslan; Yakunin, A; Laskowski, R; Skarina, T; Evdokimova, E; Doherty-Kirby, A; Lajoie, G; Thornton, J; Arrowsmith, Cheryl; Savchenko, Alexei; Joachimiak, Andrzej; Edwards, AnnIntegrating structure, bioinformatics and enzymology to discover function : BioH, a new carboxylesterase from E. coli.Journal of Biochemistry(2003)

Watson, Jimmy; Todd, A; Bray, Jason; Laskowski, R; Edwards, A; Joachimiak, Andrzej; Orengo, C; Thornton, JTarget selection and determination of function in structural genomics.IUBMB Life(2003)

Wu, R; Zhang, Rongguang; Zagnitko, Olga; Dementieva, Irina; Maltsev, Natalia; Watson, Jimmy; Laskowski, R; Gornicki, Piotr; Joachimiak, AndrzejCrystal structure of enterococcus faecalis sly A-like transcriptional factor.Journal of Biochemistry(2003)

Zhang, Rongguang; Duke, Norma; Laskowski, R; Evdokimova, E; Skarina, T; Edwards, Ann; Joachimiak, Andrzej; Savchenko, AlexeiConserved protein YecM from Escherichia coli shows structural homology to metal-binding isomerases and oxygenases.Proteins(2003)

He, H; Ding, Y; Bartlam, M; Sun, F; Le, Y; Qin, X; Tang, H; Zhang, Rongguang; Joachimiak, Andrzej; Liu, J; Zhao, Nana; Rao, ZiheCrystal structure of tabtoxin resistance protein complexed with acetyl coenzyme A reveals the mechanism for {beta}-lactam acetylation.Journal of Molecular Biology(2003)

Liu, Y; Hong, X; Kappler, J; Jiang, L; Zhang, Rongguang; Xu, L; Pan, Ching-Tsuan; Martin, W; Murphy, Ryan; Shu, Haiyun; Dai, Shaodong; Zhang, GLigand-receptor binding revealed by the TNF family member TALL-1.Nature(2003)

Osipiuk, Jerzy; Walsh, Martin; Joachimiak, AndrzejCrystal structure of MboIIA methyltransferase.Nucleic Acids Research(2003)

Giometti, Carol; Khare, Tripti; Tollaksen, Sandra; Tsapin, Alexandre; Zhu, W; Yates, J; Nealson, KAnalysis of the Shewanella oneidensis proteome by two-dimensional gel electrophoresis under non-denaturing conditions.Proteomics(2003)

Laible, Philip; Kirmaier, C; Udawatte, Chandani; Hofman, Sam; Holten, D; Hanson, DeborahQuinone reduction via secondary B-branch electron transfer in mutant bacterial reaction centers.Biochemistry(2003)

Kirmaier, C; Laible, Philip; Hindin, E; Hanson, Deborah; Holten, DDetergent effects on primary charge separation in wild-type and mutant Rhodobacter capsulatus reaction centers.Chemical Physics(2003)

Morris, Zachary; Laible, Philip; Pokkuluri, Phani; Mets, David; Hata, Aaron; Poluektov, Oleg; Thurnauer, Marion; Schiffer, Marianne; Hanson, DeborahLysine substitutions near photoactive cofactors in the bacterial photosynthetic reaction center have opposite effects on the rate of triplet energy transfer.Chemical Physics(2003)

Makowski, Lee; Rodi, DianeGenome-wide characterization of the binding repertoire of small molecule drugsHuman Genomics(2003)

Laible, Philip; Morris, Zachary; Thurnauer, Marion; Schiffer, Marianne; Hanson, DeborahInter-and intraspecific variation in excited-state triplet energy transfer rates in reaction centers of photosynthetic bacteria.Photochemistry and Photobiology(2003)

Brako, Emmanuel; Wilson, A; Jonah, Margaret; Blum, Carmen; Cerny, Elizabeth; Williams, K; Bhattacharyya, M.Cadium pathways during gestation and lactation in control vs. metallothionein 1,2-knockout mice.Toxicological Sciences(2003)

Scott, Heather; Laible, Philip; Hanson, DeborahSequences of versatile, broad-host-range vectors of the RK2 family.Plasmid(2003)

Babnigg, Gyorgy; Giometti, CarolProteome web : a web-based interface for the display and interrogation of proteomes.Proteomics(2003)

Lim, H; Hays, L; Eng, J; Tollaksen, Sandra; Giometti, Carol; Holden, J; Adams, M; Reich, C; Olsen, G; Yates, JIdentification of 2D-gel proteins : a comparison of MALDI/TOF peptide mass mapping to {mu} LC-ESI tandem mass spectrometry.Journal of Mass Spectrometry(2003)

Fischetti, Robert; Rodi, Diane; Mirza, Ahmed; Makowski, LeeWide angle x-ray scattering of proteins : effect of beam exposure on protein integrity.Journal of Synchrotron Radiation(2003)

Keefe, Lisa; Ginell, Stephan; Howard, AndrewWorkshop on high-throughput macromolecular crystallography.Synchrotron Radiation News(2003)

Zhang, Rongguang; Andersson, C; Savchenko, Alexei; Skarina, T; Evdokimova, E; Beasley, S; Arrowsmith, Cheryl; Edwards, A; Joachimiak, Andrzej; Mowbray, SStructure of escherichia coli ribose-5-phosphate isomerase : a ubiquitous enzyme of the pentose phosphate pathway and the Calvin cycle.Structure(2003)

Regunathan, Akhila; Glesne, David; Wilson, A; Song, J; Flores, Tony; Bhattacharyya, M.Microarray analysis of changes in bone cell gene expression early after cadmium gavage in mice.Toxicology and applied pharmacology(2003)

Shimaoka, M; Xiao, Ting; Liu, J; Yang, Y; Dong, Yongqi; Jun, C; McCormack, A; Zhang, Rongguang; Joachimiak, Andrzej; Takagi, A; Wang, J; Springer, TimothyStructures of the {alpha}L I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation.Cell(2003)

Li, D; Zhao, Rui; Lilyestrom, Wayne; Gai, Dahai; Zhang, Rongguang; DeCaprio, J; Fanning, E; Joachimiak, Andrzej; Szakonyi, Gerda; Chen, Xue-ShiStructure of the replicative helicase of the oncoprotein SV40 large tumour antigen.Nature(2003)

2002

Giometti, Carol; Reich, Claudia; Tollaksen, Sandra; Babnigg, Gyorgy; Lim, Hanjo; Zhu, Wenhong; Yates, John; Olsen, GaryGlobal analysis of a 'simple' proteome : methanoccus jannaschii.Journal of Chromatography B(2002)

Lai, Barry; Maser, Jorg; Paunesku, Tatjana; Woloschak, GayleReport on workshop of biological applications of x-ray microbeams.International Journal of Radiation Biology(2002)

Zhang, Rongguang; Pappas, Thrasyvoulos; Brace, J; Miller, P; Oulmassov, T; Molyneaux, J; Anderson, J; Bashkin, J; Winans, S; Joachimiak, AndrzejStructure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.Nature(2002)

Beliaev, A; Thompson, D; Khare, Tripti; Lim, H; Brandt, C; Li, G; Murray, Ann; Heidelberg, J; Giometti, Carol; Yates, Jamie; Nealson, K; Tiedje, J; Zhou, JGene and protein expression profiles of Shewanella oneidensis during anaerobic growth with different electron acceptors.OMICS: A Journal of Integrative Biology(2002)

Saridakis, Vivian; Kim, Y; Kumar, Pravindra; Xu, X; Semesi, A; Joachimiak, Andrzej; Arrowsmith, Cheryl; Edwards, AnnThe crystal structure of hypothetical protein MTH1491 from Methanobacterium thermoautotropicum.Protein Science(2002)

Yoon, Joon; Laible, Philip; Gu, Minyi; Scott, Heather; Collart, FrankExpress primer tool for high-throughput gene cloning and expression.Biotechnology(2002)

Giometti, Carol; Reich, C; Tollaksen, Sandra; Babnigg, Gyorgy; Lim, H; Zhu, W; Olsen, GGlobal analysis of a "simple" proteome : methanococcus jannaschii.Journal of Chromatography B(2002)

Zhang, Rongguang; Kim, Y; Skarina, T; Beasley, S; Laskowski, R; Arrowsmith, Cheryl; Edwards, Ann; Joachimiak, Andrzej; Savchenko, AlexeiCrystal structure of Thermotoga maritima 0065 - a member of the IclR transcriptional factor familyJournal of Biochemistry(2002)

Skarina, T; Evdokimova, E; Beasley, S; Edwards, A; Joachimiak, Andrzej; Savchenko, AlexeiCrystal structure of glutamine amidotransferase from Thermotoga maritima.Proteins(2002)

Pokkuluri, Phani; Laible, Philip; Deng, Y; Wong, Terrence; Hanson, D; Schiffer, MarianneThe structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position.Biochemistry(2002)

Jing, H; Takagi, J; Liu, J; Lindgren, Stephanie; Zhang, Rongguang; Joachimiak, Andrzej; Springer, TimothyArchaeal surface layer proteins contain {beta}-propeller, PKD, and {beta}-helix domains, and are related to metazoan cell surface proteins.Structure(2002)

Li, N; Sickmier, E; Zhang, Rongguang; Joachimiak, Andrzej; White, StephenThe MotA transcription factor from bacteriophage T4 contains a novel DNA-binding domain : the 'double wing' motif.Molecular Microbiology(2002)

Londer, Yuri; Pokkuluri, Phani; Tiede, David; Schiffer, MarianneProduction and preliminary characterization of a recombinant triheme cytochrome c7 from Geobacter sulfurreducens in Escherichia coli.Biochimica et Biophysica Acta. Bioenergetics(2002)

Ortlund, Eric; Parker, C; Schreck, A; Ginell, Stephan; Minor, Wladyslaw; Sodetz, J; Lebioda, LukaszCrystal structure of human complement protein C8{gamma} at 1.2 {Angstrom} resolution reveals a lipocalin fold and a distinct ligand binding site.Biochemistry(2002)

Pokkuluri, Phani; Cai, Xiaoyin; Raffen, R; Gu, M; Stevens, Fred; Schiffer, MarianneFactors contributing to decreased protein stability when aspartic acid residues are in {beta}-sheet regions.Protein Science(2002)

Dieckman, L; Gu, M; Stols, Lucy; Donnelly, Mark; Collart, FrankHigh throughput methods for gene cloning and expression.Protein Expression and Purification(2002)

Ikeguchi, Y; Skarina, T; Beasley, S; Arrowsmith, Cheryl; Edwards, Ann; Joachimiak, Andrzej; Pegg, A; Savchenko, AlexeiThe crystal structure of spermidine synthase with a multisubstrate adduct inhibitor.Nature Structural Biology(2002)

Tan, Kemin; Zelus, B; Meijers, Rob; Liu, J; Bergelson, J; Zhang, Rongguang; Duke, Norma; Joachimiak, Andrzej; Holmes, K; Wang, JCrystal structure of murine coronavirus receptor sCEACAM1a[1,4],a member of the carcinoembtyonic antigen familyThe EMBO Journal(2002)

Rodi, Diane; Soares, Alexei; Makowski, LeeViral morphogenesis is the dominant source of sequence censorship in M13 combinatorial peptide phage display.Journal of Molecular Biology(2002)

Zhang, Rongguang; Vinokour, Elena; Grembecka, Jolanta; Collart, Frank; Dementieva, Irina; Minor, Wladyslaw; Joachimiak, AndrzejStructure of Bacillus subtilis YXKO - a member of UPF0031 - a putative kinase.Journal of Structural Biology(2002)

Kim, S; Zhang, Rongguang; Braunstein, S; Joachimiak, Andrzej; Cvekl, A; Hedge, RStructure of the retinal determination protein Dachshund reveals a DNA-binding motif.Structure(2002)

Kim, Youngchang; Skarina, T; Beasley, S; Laskowski, R; Joachimiak, Andrzej; Edwards, A; Savchenko, AlexeiCrystal structure of escherichia coli EC1530, a glyoxylate induced protein ygbM.Proteins(2002)

Kirmaier, C; Laible, Philip; Czarnecki, K; Hata, Aaron; Hanson, Deborah; Bocian, D; Holten, DComparison of M-side electron transfer in Rb. sphaeroides and Rb. capsulatus reaction centers.Journal of Physical Chemistry B(2002)

Zhang, Rongguang; Dementieva, Irina; Duke, Norma; Collart, Frank; Quaite-Randall, E; Alkire, Randy; Dieckman, Lynda; Maltsev, Natalia; Korolev, O; Joachimiak, AndrzejCrystal structure of Bacillus subtilis IolI shows Endonuclease IV fold with altered Zn-binding.Proteins(2002)

Rotella, FrankCrystallography : then, now and beyond.Zeitschrift für Kristallographie(2002)

Pokkuluri, Phani; Raffen, R; Dieckman, Lynda; Boogaard, Connie; Stevens, Fred; Schiffer, MarianneIncreasing protein stability by polar surface residues : domain-wide consequences of interactions within a loop.Biophysical Journal(2002)

Tan, Kemin; Duquette, M; Liu, J; Dong, Yongqi; Zhang, Rongguang; Joachimiak, Andrzej; Lawler, J; Wang, JCrystal structure of the TSP-1 type 1 repeats : a novel layered fold and its biological implication.Journal of Cell Biology(2002)

Xiong, J; Stehle, T; Zhang, Rongguang; Joachimiak, Andrzej; Goodman, Steven; Arnaout, M. AminCrystal structure of the extracellular segment of integrin {alpha}V{beta}3 in complex with an Arg-Gly-Asp ligand.Science(2002)

Koroleva, Olga; Petterson, K; Gu, Minyi; Collart, Frank; Dementieva, Irina; Joachimiak, AndrzejAutotracing of E. coli acetate CoA transferase {alpha}-subunit structure using 3.4 {angstrom} MAD and 1.9 {angstrom} native data.Acta Crystallographica. Section D(2002)

2001

Osipiuk, Jerzy; Gornicki, Piotr; Maj, Luke; Dementieva, Irina; Joachimiak, AndrzejStreptococcus pneumonia YlxR at 1.35 {angstrom} shows a putative new fold.Acta Crystallographica. Section D(2001)

Giometti, Carol; Reich, C; Tollaksen, Sandra; Babnigg, Gyorgy; Lim, H; Yates, J; Olsen, GStructural modifications of Methanococcus jannaschii flagellin proteins revealed by proteome analysis.European Journal of Mass Spectrometry(2001)

Rodi, Diane; Agoston, G; Manon, R; Lapcevich, R; Green, Susan; Makowski, LeeIdentification of small molecule binding sites within proteins using phage display technology.Combinatorial Chemistry & High Throughput Screening(2001)

Robinson, Howard; Gao, Y; Yang, X; Sanishvili, Ruslan; Joachimiak, Andrzej; Wang, AStructural basis of the inhibitory mechanism of actinomycin D on RNA polymerase.Biochemistry(2001)

Ciszak, Ewa; Korotchkina, L; Hong, YS; Joachimiak, Andrzej; Patel, MCrystallization and initial x-ray diffraction analysis of human pyruvate dehydrogenase.Acta Crystallographica. Section D(2001)

Dul, J; Davis, David; Williamson, E; Stevens, Fred; Argon, YairHsp70 and antifibrillogenic peptides promote degradation and inhibit intracellular aggregation of amyloidogenic light chains.Cell Biology(2001)

Tandori, J; Baciou, L; Alexov, E; Maroti, P; Schiffer, Marianne; Hanson, Deborah; Sebban, PRevealing the involvement of extended hydrogen-bond networks in the cooperative function between distant sites in bacterial reaction centres.Journal of Biochemistry(2001)

Paunesku, Tatjana; Mittal, Sonia; Protic, Miroslava; Oryhon, Jeremy; Joachimiak, Andrzej; Woloschak, GayleProliferating cell nuclear antigen (PCNA) : ringmaster of the genome.International Journal of Radiation Biology(2001)

Hua, Q; Dementieva, Irina; Walsh, Martin; Hallenga, K; Weiss, Miriam; Joachimiak, AndrzejA thermophilic mini-chaperonin contains a conserved polypeptide-binding surface: combined crystallographic and NMR studies of the GroEL Apical Domain with implications for substrate interactionsJournal of Molecular Biology(2001)

Robinson, Howard; Gao, Y; Yang, X; Sanishvili, Ruslan; Joachimiak, Andrzej; Wang, ACrystallographic analysis of a novel complex of actinomycin D bound to the DNA cecamer CGATCGATCG.Biochemistry(2001)

Dementieva, Irina; Sanishvili, Ruslan; Minor, Wladyslaw; Otwinowski, O; Joachimiak, AndrzejUsing surface-bound rubidium ions for protein phasing.Acta Crystallographica. Section D(2001)

Wang, J; Meijers, Rob; Xiong, Y; Liu, J; Sakihama, T; Zhang, Rongguang; Joachimiak, Andrzej; Reinherz, ECrystal structure of the human CD4 N-terminal two-domain fragment complexed to a class II MHC molecule.Proceedings of the National Academy of Sciences of the United States of America(2001)

Xiong, J; Stehle, T; Diefenbach, B; Zhang, Rongguang; Dunker, R; Scott, D; Joachimiak, Andrzej; Goodman, S; Arnaout, M. AminCrystal structure of the extracellular segment of integrin {alpha}V{beta}3.Science(2001)

Holden, J; Poole, F; Tollaksen, Sandra; Giometti, Carol; Lim, H; Yates, J; Adams, MIdentification of membrane proteins in the hyperthermophilic archaeon Pyrococcus furiosus using proteomics and prediction programs.Comparative and Functional Genomics(2001)

Zhang, Rongguang; Skarina, T; Katz, Jordan; Khachatryan, A; Vyas, S; Arrowsmith, Cheryl; Clarke, S; Edwards, A; Joachimiak, Andrzej; Savchenko, AlexeiStructure of thermotoga maritima stationary phase survival protein SurE : a novel acid phosphatase.Structure(2001)

Giometti, Carol; Reich, C; Tollaksen, Sandra; Babnigg, Gyorgy; Lim, H; Yates, J; Olsen, GStructural modifications of Methanococcus jannaschii flagellin proteins revealed by proteome analysis.Proteomics(2001)

Cook, R; Champion, Kathleen; Giometti, CarolMethanol toxicity and formate oxidation in NEUT2 mice.Archives of Biochemistry and Biophysics(2001)

2000

Stevens, Fred; Kisilevsky, RImmunoglobulin light chains, glycosaminoglycans and amyloid.Cellular and Molecular Life Sciences(2000)

Teplova, Marianna; Tereshko, V; Sanishvili, Ruslan; Joachimiak, Andrzej; Bushueva, T; Anderson, Wayne; Egli, MartinThe structure of the yrdC gene product from Escherichia coli reveals a new fold and suggests a role in RNA binding.Protein Science(2000)

Stevens, FredFour structural risk factors identify most fibril-forming kappa light chains.ACM Transactions on Programming Languages and Systems(2000)

Schoehn, G; Quaite-Randall, E; Joachimiak, Andrzej; Saibil, HThree conformations of an Archaeal chaperonin, TF55 from Sulfolobus shibatae.Journal of Molecular Biology(2000)

Giometti, Carol; Liang, X; Tollaksen, Sandra; Wall, D; Lubman, D; Subbarao, V; Sambasiva Rao, MMouse liver selenium-binding protein decreased in aboundance by peroxisome proliferators.Electrophoresis(2000)

Stevens, Fred; Pokkuluri, Phani; Schiffer, MarianneProtein conformation and disease : pathological consequences of analogous mutations in homologous proteins.Biochemistry(2000)

Walsh, Martin; Otwinowski, Zbyszek; Perrakis, A; Anderson, P; Joachimiak, AndrzejStructure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site.Structure(2000)

Cachau, R; Howard, E; Barth, P; Mitschler, A; Chevrier, B; Lamour, Valerie; Joachimiak, Andrzej; Sanishvili, Ruslan; Van Zandt, M; Sibley, Edgar; Moras, D; Podjarny, AlbertoModel of the catalytic mechanism of human aldose reductase based on quantum chemical calculations.Journal de Physique IV(2000)

Huang, X; Poy, F; Zhang, Rongguang; Joachimiak, Andrzej; Sudol, M; Eck, MichaelStructure of a WW domain-containing fragment of dystrophin complexed with {beta}-dystroglycan.Nature Structural Biology(2000)

Alkire, Randy; Rosenbaum, Gerold; Evans, GwyndafDesign of a vacuum-compatible high-precision monochromatic beam-position monitor for use with synchrotron radiation from 5 to 25 keV.Journal of Synchrotron Radiation(2000)

Paulnesku, T; Zhang, Y; Gemmell, Margaret; Woloschak, Gaylep53 gene deletions in paraffin-preserved lymphold tumors from irradiated mice.Leukemia Research(2000)

Robinson, Howard; Gao, Y; Sanishvili, Ruslan; Joachimiak, Andrzej; Wang, AHexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.Nucleic Acids Research(2000)

Davis, D; Raffen, R; Vogen, S; Williamson, Emma; Stevens, Fred; Argon, YairInhibition of amyloid fiber assembly by both BiP and its target peptide.Immunity(2000)

1999

Stevens, Fred; Argon, YairProtein folding in the ER.Seminars in Cell & Developmental Biology(1999)

El-Kabbani, Ossama; Old, S; Ginell, Stephan; Carper, DAldose and aldehyde reductases : structure-function studies on the coenzyme and inhibitor-binding sites.Molecular Vision(1999)

Zhang, Rongguang; Evans, Gwyndaf; Rotella, Frank; Westbrook, Edwin; Huberman, Eliezer; Joachimiak, Andrzej; Collart, FrankDifferential signatures of bacterial and mammalian IMP dehydrogenase enzymes.Current Medicinal Chemistry(1999)

Walsh, Martin; Dementieva, Irina; Evans, Gwyndaf; Sanishvili, Ruslan; Joachimiak, AndrzejTaking MAD to the extreme : ultrafast protein structure determination.Acta Crystallographica. Section D(1999)

Miksovska, J; Schiffer, Marianne; Hanson, Deborah; Sebban, PProton uptake by bacterial reaction centers : the protein complex responds in a similar manner to the reduction of either quinone acceptor.Proceedings of the National Academy of Sciences of the United States of America(1999)

Reinherz, E; Tan, Kemin; Tang, L; Kern, Patrick; Liu, J; Xiong, Y; Hussey, R; Smolyar, A; Hare, B; Zhang, Rongguang; Joachimiak, Andrzej; Chang, H; Wagner, G; Wang, JThe crystal structure of a T cell receptor in complex with peptide and MHC class II.Science(1999)

Deret, S; Denoroy, L; Lamarine, M; Vidal, R; Mougenot, B; Frangione, B; Stevens, Fred; Ronco, P; Aucouturier, PKappa light chain-associated Fanconi's syndrome : molecular analysis of monoclonal immunoglobulin light chains from patients with and without intracellular crystals.Protein Engineering(1999)

Lewis, F; Liu, X; Wu, Y; Miller, S; Wasielewski, Michael; Letsinger, R; Sanishvili, Ruslan; Joachimiak, Andrzej; Tereshko, V; Egli, MartinStructure and photoinduced electron transfer in exceptionally stable synthetic DNA hairpins with stilbenediether linkers.Journal of the American Chemical Society(1999)