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Reference | Publication | Biosciences Division

BIO 2007 Publications

O'Loughlin, Edward; Larese-Casanova, Philip; Cook, Robert; Scherer, MGreen rust formation from the bioreduction of {gamma}-FeOOH (lepidocrocite) : comparison of several Shewanella species.Geomicrobiology Journal(2007)

Maresso, A; Wu, Ruiying; Kern, J; Zhang, Rongguang; Janik, Dorota; Missiakas, D; Duban, M; Joachimiak, Andrzej; Schneewind, OlafActivation of inhibitors by sortase triggers irreversible modification of the active site.Journal of Biochemistry(2007)

Boyanov, Maxim; O'Loughlin, Edward; Roden, E; Fein, Jeremy; Kemner, KennethAdsorption of Fe(II) and U(VI) to carboxyl-functionalized microspheres : the influence of speciation on uranyl reduction studied by titration and XAFS.Geochimica et Cosmochimica Acta(2007)

Finney, Lydia; Mandava, Suneeta; Ursos, Lyann May; Zhang, Wen; Rodi, Diane; Vogt, Stefan; Legnini, Daniel; Maser, Jorg; Ikpatt, F; Olopade, O; Glesne, DavidX-ray fluorescent microscopy reveals large-scale relocalization and extracellular translocation of cellular copper during angiogenesis.Proceedings of the National Academy of Sciences of the United States of America(2007)

Burgos, W; Senko, John; Dempsey, B; Roden, E; Stone, J; Kemner, Kenneth; Kelly, ShellySoil humic acid decreases biological uranium (VI) reduction by Shewanella putrefaciens CN32.Environmental Engineering Science(2007)

Rezacova, Pavlina; Krejcirikova, V; Borek, Dominika; Moy, Shiu; Joachimiak, Andrzej; Otwinowski, ZbyszekThe crystal structure of the effector-binding domain of the trehalose repressor TreR from Bacillus subtilis 168 reveals a unigue quarternary assembly.Proteins(2007)

Li, Shisheng; Giometti, CarolA combinatorial approach to studying protein complex composition by employing size-exclusion chromatography and proteome analysis.Journal of Separation Science(2007)

Edirisinghe, P; Moore, J; Skinner-Nemec, K; Lindberg, Carl; Giometti, Carol; Veryovkin, Igor; Hunt, Jerry; Pellin, Michael; Hanley, LukeDetection of in-situ derivatized peptides in microbial biofilms by laser desorption 7.87 eV postionizaton mass spectrometry.Analytical Chemistry(2007)

Makarov, Oleg; Benn, Richard; Corcoran, S; Devarapalli, Satish; Fischetti, Robert; Hilgart, Mark; Smith, W; Stepanov, Sergey; Xu, SEPICS controlled sample mounting robots at the GM/CA CAT.Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment(2007)

Lesnyak, D; Osipiuk, Jerzy; Skarina, T; Sergiev, P; Bogdanov, Alexei; Edwards, A; Savchenko, Alexei; Joachimiak, Andrzej; Dontsova, OMethyltransferase that modifies guanine 966 of the 16 S rRNA functional identification and rertiary structure.Journal of Biochemistry(2007)

Watson, J; Sanderson, S; Ezersky, Alexandra; Savchenko, Alexei; Edwards, A; Orengo, C; Joachimiak, Andrzej; Laskowski, R; Thornton, JohnTowards fully automated structure-based function prediction in structural genomics : a case study.Journal of Molecular Biology(2007)

Lengke, Maggy; Ravel, Bruce; Fleet, Michael; Wanger, Gregory; Gordon, Robert; Southam, GordonPrecipitation of gold by the reaction of aqueous gold(III)-chloride with cyanobacteria at 25-80{degrees}C, studied by x-ray absorption spectroscopy.Canadian Journal of Chemistry(2007)

Stepanov, SergeyTransformation of x-ray server from a set of WWW-accessed programs into WWW-based library for remote calls from x-ray data analysis software.Thin Solid Films(2007)

Cuff, Marianne; Li, Hui; Moy, Shiu; Watson, J; Cipriani, Andrea; Joachimiak, AndrzejCrystal structure of an acetyltransferase protein from Vibrio cholerae strain N16961.Proteins: Structure, Function, and Bioinformatics(2007)

Stols, Lucy; Zhou, Min; Eschenfeldt, William; Millard, Cynthia; Abdullah, James; Collart, Frank; Kim, Youngchang; Donnelly, MarkNew vectors for co-expression of proteins : structure of bacillus subtilis ScoAB obtained by high-throughput protocols.Protein Expression and Purification(2007)

Ahrendt, Angela; Tollaksen, Sandra; Lindberg, Carl; Zhu, W; Yates III, J; Nevin, K; Lovley, D; Giometti, CarolSteady state protein levels in Geobacter metallireducens grown with Iron (III) citrate or nitrate as terminal electron acceptor.Applied and Environmental Microbiology(2007)

Kelly, Shelly; Kemner, Kenneth; Brooks, SonjaX-ray absorption spectroscopy identifies calcium-uranyl-carbonate complexes at environmental concentrations.Geochimica et Cosmochimica Acta(2007)

Sanishvili, Ruslan; Besnard, C; Camus, F; Fleurant, M; Pattison, P; Bricogne, Gerard; Schiltz, MPolarisation-dependence of anomalous scattering in brominated DNA and RNA molecules, and importance of crystal orientation in SAD and MAD phasing.Journal of Applied Crystallography(2007)

Petrova, Tatiana; Cuff, Marianne; Wu, Ruiying; Kim, Youngchang; Holzle, Denise; Joachimiak, AndrzejNovel hexamerization motif is discovered in a conserved cytoplasmic protein from Salmonella typhimurium.Journal of Structural and Functional Genomics(2007)

Grabowski, Marek; Joachimiak, Andrzej; Otwinowski, Zbyszek; Minor, WladyslawStructural genomics : keeping up with expanding knowledge of the protein universe.Current Opinion in Structural Biology(2007)

Stevens, Fred; Bobrovnik, SDeconvolution of antibody affinities and concentrations by non-linear regression analysis of competitive ELISA data.Journal of Immunological Methods(2007)

Nettles, Kendall; Bruning, John; Gil, G; O'Neill, E; Nowak, J; Hughs, A; Kim, Youngchang; DeSombre, E; Dilis, R; Hanson, R; Joachimiak, Andrzej; Greene, GeoffreyStructural plasticity in the oestrogen receptor ligand-binding domain.EMBO Reports(2007)

Zhou, H; Sheng, S; Compton, David; Kim, Youngchang; Joachimiak, Andrzej; Sharma, Sanjay; Carlson, K; Katzenellenbogen, B; Nettles, Kendall; Greene, Geoffrey; Katzenellenbogen, JStructure-guided optimization of estrogen receptor binding affinity and antagonist potency of pyrazolopyrimidines with basic side chains.Journal of Medicinal Chemistry(2007)

Rodi, Diane; Mandava, Suneeta; Gore, David; Makowski, Lee; Fischetti, RobertDetection of functional ligand-binding events using synchrotron x-ray scattering.Journal of Biomolecular Screening(2007)

Jastrow, Julie; Amonette, James; Bailey, VMechanisms controlling soil carbon turnover and their potential application for enhancing carbon sequestration.Climatic Change(2007)

Nocek, Boguslaw; Evdokimova, E; Proudfoot, M; Kudritska, M; Grochowski, L; White, R; Savchenko, Alexei; Yakunin, A; Edwards, A; Joachimiak, AndrzejStructure of an amide bond forming F{sub 420} : {gamma}-glutamyl ligase from Archaeoglobus Fulgidus - A member of a new family of non-ribosomal peptide synthases.Journal of Molecular Biology(2007)

Wang, J; Alkire, Randy; Joachimiak, AndrzejTriclinic lysozyme at 0.65 angstrom resolution.Acta Crystallographica. Section D(2007)

Biadene, M; Hazemann, I; Cousido, A; Ginell, Stephan; Joachimiak, Andrzej; Sheldrick, G; Podjarny, Alberto; Schneider, ThereseThe atomic resolution structure of human aldose reductase reveals that rearrangement of a bound ligand allows the opening of the safety-belt loop.Acta Crystallographica. Section D(2007)

Ahrendt, Angela; Tollaksen, Sandra; Lindberg, Carl; Zhu, W; Yates, J; Nevin, K; Lovley, D; Giometti, CarolSteady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor.Proteomics(2007)