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Reference | Publication | Biosciences Division

BIO 2008 Publications

Makowski, Lee; Rodi, Diane; Mandava, Suneeta; Mink, D; Fischetti, Robert; Gore, DavidMolecular crowding inhibits intramolecular breathing motions in proteins.Journal of Molecular Biology(2008)

Tan, Kemin; Li, Hui; Zhang, Rongguang; Gu, Minyi; Clancy, Shonda; Joachimiak, AndrzejStructures of open (R) and close (T) states of Prephenate Dehydratase (PDT) - implication of allosteric regulation by L-phenylalanine.Journal of Structural Biology(2008)

Zhuang, Jie; McCarthy, John; Perfect, E; Mayer, L; Jastrow, JulieSoil water hysteresis in water-stable microaggregates as affected by organic matter.Soil Science Society of America Journal(2008)

Nocek, Boguslaw; Mulligan, Rory; Bargassa, Monireh; Collart, Frank; Joachimiak, AndrzejCrystal structure of aminopeptidase N from human pathogen Neisseria meningitides.Proteins: Structure, Function, and Bioinformatics(2008)

Scholle, Michael; Banach, Bridget; Hamdan, Samir; Richardson, CPeptide ligands specific to the oxidized form of escherichia coli thioredoxin.Biochimica et Biophysica Acta. Bioenergetics(2008)

Qiu, Yang; Zhang, Rongguang; Binkowski, Thomas; Tereshko, V; Joachimiak, Andrzej; Kossiakoff, AnthonyThe 1.38 angstrom crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway.Proteins(2008)

O'Loughlin, EdwardEffects of electron transfer mediators on the bioreduction of lepidocrocite ({gamma}-FeOOH).Environmental Science and Technology(2008)

Pokkuluri, Phani; Pessanha, M; Londer, Yuri; Wood, Stephen; Duke, Norma; Wilton, R; Catarino, T; Salgueiro, C; Schiffer, MarianneStructures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens : implications for signal transduction.Journal of Molecular Biology(2008)

Tan, Kemin; Duquette, M; Liu, J; Shanmugasundaram, K; Joachimiak, Andrzej; Gallagher, J; Rigby, A; Wang, J; Lawler, JHeparin-induced cis- and trans-dimerization modes of the thrombospondin-1 N-terminal domain.Journal of Biochemistry(2008)

Phillips, D; Watson, D; Kelly, Shelly; Ravel, Bruce; Kemner, KennethDeposition of uranium precipitates in dolomitic gravel fill.Environmental Science and Technology(2008)

Matamala, R; Jastrow, Julie; Miller, Raymond; Garten, CTemporal changes in C and N stocks of restored prairie : implications for C sequestration strategies.Ecological Applications(2008)

Morgado, L; Bruix, M; Orshonsky, Valerie; Londer, Yuri; Duke, Norma; Yang, X; Pokkuluri, Phani; Schiffer, Marianne; Salgueiro, CStructural insights into the modulation of the redox properties of two Geobacter sulfurreducens homologous triheme cytochromes.Biochimica et Biophysica Acta. Bioenergetics(2008)

Alkire, Randy; Duke, Norma; Rotella, FrankIs your cold-stream working for you or against you? An in-depth look at temperature and sample motion.Journal of Applied Crystallography(2008)

Rezacova, Pavlina; Borek, Dominika; Moy, Shiu; Joachimiak, Andrzej; Otwinowski, ZbyszekCrystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.Proteins(2008)

Filley, T; Boutton, T; Liao, Julia; Jastrow, Julie; Gamblin, DChemical changes to nonagrregtaed particulate soil organic matter following grassland-to woodland transition ina subtropical savanna.Journal of Geophysical Research(2008)

Beak, Douglas; Wilkin, Richard; Ford, Robert; Kelly, ShellyExamination of arsenic speciation in sulfidic solutions using x-ray absorption spectroscopy.Environmental Science and Technology(2008)

Londer, Yuri; Giuliani, Sarah; Peppler, Terese; Collart, FrankAddressing Shewanella oneidensis cytochromome : a first step towards high-throughput expression of cytochromes c.Protein Expression and Purification(2008)

Giulliani, S; Frank, A; Collart, FrankFunctional assignment of solute-binding proteins of ABC transporters using a fluorescence-based thermal shift assay.Biochemistry(2008)

Kemner, KennethHard x-ray micro(spectro)scopy : a powerful tool for the geomicrobiologist.Geobiology(2008)

Kelly, Shelly; Kemner, Kenneth; Carley, J; Criddle, C; Jardine, P; Marsh, Tamara; Phillips, D; Watson, Demetrius; Wu, WSpeciation of uranium in sediments before and after in situ biostimulation.Environmental Science and Technology(2008)

Stepanov, Sergey; Forrest, RFitting dynamical x-ray diffraction data over the World Wide Web.Journal of Applied Crystallography(2008)

McCarthy, John; Ilavsky, Jan; Jastrow, Julie; Mayer, L; Perfect, E; Zhuang, JieProtection of organic carbon in soil microaggregates occurs via restructuring of aggregate porosity and filling of pores with accumulating organic matter.Geochimica et Cosmochimica Acta(2008)

Zhuang, Jie; McCarthy, John; Perfect, E; Mayer, L; Jastrow, JulieSoil water hysteresis in water-stable microaggregates as affected by organic matter.Soil Science Society of America Journal(2008)

Sanishvili, Ruslan; Venugopalan, Nagarajan; Yoder, Derek; Becker, M; Xu, S; Corcoran, S; Fischetti, Robert; Akey, David; Smith, JA 7 {mu}m mini-beam improves diffraction data from small or imperfect crystals of macromolecules.Acta Crystallographica(2008)

Proudfoot, M; Sanders, S; Singer, A; Zhang, Rongguang; Brown, G; Binkowski, A; Xu, L; Lukin, J; Murzin, A; Joachimiak, Andrzej; Arrowsmith, Cheryl; Edwards, A; Savchenko, Alexei; Yakunin, ABiochemical and structural characterization of a novel family of cystathionine {beta}-synthase domain proteins fused to a Zn ribbon-like domain.Journal of Molecular Biology(2008)

Makowski, Lee; Rodi, Diane; Mandava, Suneeta; Minh, David; Gore, David; Fischetti, RobertMolecular crowding inhibits intramolecular breathing motions in proteins.Journal of Molecular Biology(2008)

Wood, Stephen; Li, Xiaohui; Cotta, M; Biely, P; Duke, Norma; Schiffer, Marianne; Pokkuluri, PhaniCrystallization and preliminary X-ray diffraction analysis of the glucuronoyl esterase catalytic domain from Hypocrea jecorina.Acta Crystallographica. Section F(2008)