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Reference | Publication | Mathematics and Computer Science Division

MCS 2016 Publications

2016

P. Guhur, Zhang, H., Peterka, T., Constantinescu, E. M., and Cappello, F., “Lightweight and Accurate Silent Data Corruption Detection in Ordinary Differential Equation Solvers”, in Euro-Par 2016, Grenoble, France, 2016.

V. Sokolov, Larson, J., Munson, T., Auld, J., and Karbowski, D., “Platoon Formation Maximization through Centralized Routing and Departure Time Coordination”, 2016.

O. Marin, Schanen, M., and Fischer, P. F., “Large-Scale Lossy Data Compression Based On A Priori Error Estimator In A Spectral Element Code”, 2016.

M. Fagan, Schlachter, J., Yoshii, K., Leyffer, S., Palem, K., Snir, M., Wild, S. M., and Enz, C., “Overcoming the Power Wall by Exploiting Application Inexactness and Emerging COTS Architectural Features”, in 20th IEEE International System-on-Chip Conference, Seattle, WA, 2016.

P. Guhur, Cappello, F., Peterka, T., and Abou-Kandil, H., “Using Error Estimations for Detecting Silent Data Corruption in Numerical Integration Solvers”, 2016.

J. Larsonand Wild, S. M., “Asynchronously Parallel Optimization Solver for Finding Multiple Minima”, 2016.

D. Dai, Carns, P. H., Ross, R., Jenkins, J., Muirhead, N., and Chen, Y., “An Asynchronous Traversal Engine for Graph-Based Rich Metadata Management”, Parallel Computing, vol. 58, pp. 140-156, 2016.

A. Castello, Pena, A. J., Seo, S., Mayo, R., Balaji, P., and Quintana-Orti, E. S., “A Review of Lightweight Thread Approaches for High Performance Computing”, in IEEE Cluster 2016, 2016.

K. Kim, Yang, F., Zavala, V. M., and Chien, A. A., “Data Centers as Dispatchable Loads to Harness Stranded Power”, IEEE Transactions on Sustainable Energy, vol. 8, no. 1, pp. 208-218, 2016.

H. Dang, Snir, M., and Gropp, W. D., “Towards Millions of Communicating Threads”, in EuroMPI 2016, 2016.

S. Snyder, Carns, P. H., Harms, K., Latham, R., and Ross, R., “Performance Evaluation of Darshan 3.0.0 on the Cray XC30”, Argonne National Laboratory, Lemont, 2016.

A. Amer, Matsuoka, S., Pericas, M., Maruyama, N., Taura, K., Yokota, R., and Balaji, P., “Scaling FMM with Data-Driven OpenMP Tasks on Multicore Architectures”, in IWOMP 2016, 2016.

A. Amer, Lu, H., Wei, Y., Hammond, J., Matsuoka, S., and Balaji, P., “Locking Aspects in Multithreaded MPI Implementations”, 2016.

J. Meng, Seo, S., Balaji, P., Wei, Y., Wang, B., and Feng, S., “SWAP-Assembler 2: Optimization of De Novo Genome Assembler at Extreme Scale”, in 2016 45th International Conference on Parallel Processing (ICPP), 2016.

Y. Guo, Archer, C. J., Blocksome, M., Parker, S., Bland, W., Raffenetti, K., and Balaji, P., “Memory Compression Techniques for Network Address Management in MPI”, 2016.

H. Guo, He, W., Seo, S., Shen, H., and Peterka, T., “Extreme-Scale Stochastic Particle Tracing for Uncertain Unsteady Flow Analysis”, 2016.

M. Dorier, Sisneros, R., Gomez, L. A. Bautist, Peterka, T., Orf, L., Rahmani, L., Antoniu, G., and Bouge, L., “Adaptive Performance-Constrained in Situ Visualization of Atmospheic Simulations”, in Cluster 2016, Taipei, Taiwan, 2016.

J. Larson, Munson, T., and Sokolov, V., “Coordinated Platoon Routing in a Metropolitan Network”, in SIAM Workshop on Combinatorial Scientific Computing (CSC16), Albuquerque, NM, 2016.

D. Ellsworth, Patki, T., Perarnau, S., Seo, S., Amer, A., Zounmevo, J. A., Gupta, R., Yoshii, K., Hoffman, H., Malony, A., Schulz, M., and Beckman, P. H., “Systemwide Power Management with Argo”, in Parallel and Distributed Processing Symposium Workshops, 2016.

S. Seo, Amer, A., Balaji, P., Bordage, C., Bosilca, G., Brooks, A., Castello, A., Genet, D., Herault, T., Jindal, P., Kale, L., Krishnamoorthy, S., Lifflander, J., Lu, H., Meneses, E., Snir, M., Sun, Y., and Beckman, P. H., “Argobots: A Lightweight Threading/Tasking Framework”, IEEE Transactions on Parallel and Distributed Systems, 2016.

M. Mubarak, Carothers, C. D., Ross, R. B., and Carns, P. H., “Enabling Parallel Simulation of Large-Scale HPC Network Systems”, IEEE Transactions on Parallel and Distributed Systems (TPDS), vol. 28, no. 1, pp. 87-100, 2016.

A. Tripathi, McNulty, I., Munson, T., and Wild, S. M., “Single-View Phase Retrieval of an Extended Sample by Exploiting Edge Feature Detection and Sparsity”, Optics Express, vol. 24, no. 21, pp. 24719-24738, 2016.

M. Dorier, Mubarak, M., Ross, R., Li, J. K., Carothers, C. D., and Ma, K. - L., “Evaluation of Topology-Aware Broadcast Algorithms for Dragonfly Networks”, in 2016 IEEE International Conference on Cluster Computing, Taipei, Taiwan, 2016.

W. E. Bethel, Greenwald, M., van Dam, K. K., Parashar, M., Wild, S. M., and Wiley, H. S., “Management, Analysis, and Visualization of Experimental and Observational Data - The Convergence of Data and Computing”, in IEEE 12th International Conference on e-Science, 2016.

K. Yoshii, Finkel, H., and Cappello, F., “Benchmarking Under the Hood of OpenCL FPGA Platforms”, in 2nd International Workshop on Heterogeneous High-performance Reconfigurable Computing, Salt Lake City, UT, 2016.

S. Perarnauand Bautista-Gomez, L., “Monitoring Strategies for Scalable Dynamic Checkpointing”, 2016.

A. Kougkas, Dorier, M., Latham, R., Ross, R., and Sun, X. - H., “Leveraging Burst Buffer Coordination to Prevent I/O Interference”, in 2016 IEEE 12th international conference on e-Science, Baltimore, MD, 2016.

Y. Guo, Archer, C. J., Blocksome, M., Parker, S., Bland, W., Raffenetti, K., and Balaji, P., “Memory Compression Techniques for Network Address Management in MPI”, in International Parallel and Distributed Processing Symposium (IPDPS), 2016.

X. Zhao, Balaji, P., and Gropp, W. D., “Scalability Challenges in Current MPI One-Sided Implementations”, in 15th International Symposium on Parallel and Distributed Computing (ISPDC), FuZhou, China, 2016.

J. Yu, Zavala, V. M., and Anitescu, M., “A Scalable Design of Experiments Framework for Sensor Placement”, Journal of Process Control, 2016.

A. Waltherand Narayanan, S. H. K., “Covering Resilience: A Recent Development for Binomial Checkpointing”, 2016.

J. Jalving, Abhyankar, S., Kim, K., Hereld, M., and Zavala, V. M., “A Graph-Based Computational Framework for Simulation and Optimization of Coupled Infrastructure Network”, 2016.

K. Kulshreshthaand Narayanan, S. H. K., “Interfacing Source Transformation AD with Operator Overloading Libraries”, 2016.

S. H. K. Narayananand Hascoet, L., “Wrappers for ADOL-C in Scripting Languages using SWIG”, 2016.

S. H. K. Narayananand Hovland, P. D., “Calculating Reuse Distance from Source Code”, 2016.

S. H. K. Narayananand Hascoet, L., “Interfacing OpenAD and Tapenade”, 2016.

M. Narayanamurthi, Bosse, T., Narayanan, S. H. K., and Hovland, P. D., “AD-Suite - A Test Suite for Algorithmic Differentiation”, 2016.

T. Bosse, Narayanan, S. H. K., and Hascoet, L., “Piecewise Linear AD via Source Transformation”, 2016.

L. Liang, Mei, Z., Kim, Y. S., Ye, B., Hofman, G., Anitescu, M., and Yacout, A. M., “Mesoscale model for fission-induced recrystallization in U-7Mo alloy”, 2016.

N. Li, Constantinescu, E. M., Birge, J. R., Hedman, K. W., and Botterud, A., “Flexible Operation of Batteries in Power System Scheduling with Renewable Energy”, in Power and Energy Society General Meeting (PESGM), 2016.

F. Cappello, Yoshii, K., Finkel, H., and Cong, J., “Re-Form: FPGA-Powered True Codesign Flow for High-Performance Computing In The Post-Moore Era”, in The 2016 Post-Moore’s Era Supercomputing (PMES) Workshop, Salt Lake City, Utah, 2016.

D. Goldberg, Narayanan, S. H. K., Hascoet, L., and Utke, J., “An Optimized Treatment for Algorithmic Differentiation of an Important Glaciological Fixed-Point Problem”, Geoscientific Model Development, vol. 9, pp. 1891-1904, 2016.

M. Carlsson, Johansson, M., and Larson, J., “Scheduling Double Round-Robin Tournaments with Divisional Play using Constraint Programming”, European Journal of Operational Research, vol. 259, no. 3, pp. 1180-1190, 2016.

S. Snyder, Carns, P. H., Harms, K., Ross, R., Lockwood, G. K., and Wright, N., “Modular HPC I/O Characterization with Darshan”, in ESPT'16 Proceedings of the 5th Workshop on Extreme-Scale Programming Tools, Salt Lake City, Utah, 2016.

V. Picheny, Gramacy, R. B., Wild, S. M., and Le Digabel, S., “Bayesian Optimization Under Mixed Constraints with A Slack-Variable Augmented Lagrangian”, 2016.

Q. Shu, Liang, J., Che, L., Liu, J., and Yuan, X., “EnsembleGraph: Interactive Visual Analysis of Spatiotemporal Behaviors in Ensemble Simulation Data”, Proceedings of IEEE Pacific Visualization Symposium 2016, pp. 56-63, 2016.

J. Zhang, Guo, H., and Yuan, X., “Efficient Unsteady Flow Visualization with High-Order Access Dependencies”, Proceedings of IEEE Pacific Visualization Symposium 2016, pp. 82-97, 2016.

R. Liu, Guo, H., Zhang, J., and Yuan, X., “Comparative Visualization of Vector Field Ensembles Based on Longest Common Subsequence”, Proceedings of IEEE Pacific Visualization Symposium 2016, pp. 96-103, 2016.

F. Lin, “Performance of Leader-Follower Multiagent Systems in Directed Networks”, 2016.

N. Wolfe, Carothers, C. D., Mubarak, M., Ross, R. B., and Carns, P. H., “Modeling a Million-Node Slim Fly Network Using Parallel Discrete-Event Simulation”, in SIGSIM PADS'16, Banff, Canada, 2016.

T. Bosse, “Augmenting the One-Shot Framework by Additional Constraints”, Optimization Methods & Software, vol. 17, no. 1, pp. 1055-6788, 2016.

R. Liu, Guo, H., and Yuan, X., “A Bottom-Up Scheme for User-Defined Feature Comparison in Ensemble Data”, in SA'15 SIGGRAPH Asia, Kobe, Japan, 2016.

S. H. K. Narayanan, Goldberg, N., Heimbach, P., Marshall, D., Price, S., and Wunsch, C., “Algorithmic Differentiation for Climate Science”, 2016.

J. Larsonand Billups, C., “Stochastic Derivative-free Optimization using a Trust Region Framework”, Computational Optimization and Applications, pp. 1-27, 2016.

C. A. L. Haley, “Glitches in Time: Capturing the Underlying Dynamics of Data with Flawed Timing”, Nature, no. 532, pp. 450–451, 2016.

J. Bessac, Constantinescu, E. M., and Anitescu, M., “Stochastic Simulation of Predictive Space-Time Scenarios of Wind Speed Using Observations and Physical Models”, in American Meteorological Society, New Orleans, LA, 2016.

C. Ross, Mubarak, M., Jenkins, J., Carns, P. H., Carothers, C. D., Ross, R. B., Tang, W., Gerlach, W., and Meyer, F., “A Case Study in Using Discrete-Event Simulation to Improve the Scalability of MG-RAST”, in SIGSIM-PADS '16, Banff, Canada, 2016.

P. H. Carns, Harms, K., Jenkins, J., Mubarak, M., Ross, R., and Carothers, C. D., “Impact of Data Placement on Resilience in Large-Scale Object Storage Systems”, in 32nd International Conference on Massive Storage Systems and Technology (MSST 2016), Santa Clara, CA, 2016.

M. Otten, Larson, J., Min, M., Wild, S. M., Pelton, M., and Gray, S. K., “Origins and Optimization of Entanglement in Plasmonically Coupled Quantum Dots”, Physical Review A, vol. 94, no. 2, p. 15, 2016.